BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A05LP1|AL427699
(954 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1754 966 0.0
3x_Contig762 329 5e-90
>3x_Contig1754
Length = 26052
Score = 966 bits (487), Expect = 0.0
Identities = 503/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Minus
Query: 1 actatttcaacatgatgctgatgttccaataatttttcaaattgtttgaacatcctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 actatttcaacatgatgctgatgttccaataatttttcaaattgtttgaacatcctctca 450
Query: 61 tgcctactattccaaaatttttcaatatgaaataatcgatcacgatatacggatttgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgcctactattccaaaatttttcaatatgaaataatcgatcacgatatacggatttgata 390
Query: 121 actttccaagtggtgtcactaatagaacaaagtagtgagtgaattgcatatgcataaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 actttccaagtggtgtcactaatagaacaaagtagtgagtgaattgcatatgcataaagg 330
Query: 181 ctatcagatacagaaaattatttaagtgcatttatataagcattattttggcgtttggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctatcagatacagaaaattatttaagtgcatttatataagcattattttggcgtttggtt 270
Query: 241 caaaatattcatcaatgtgtttaattgcgcagttggatcgaaattttgtgggggttgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 caaaatattcatcaatgtgtttaattgcgcagttggatcgaaattttgtgggggttgagg 210
Query: 301 agatttttggcccgaa-gttgagtagactgatgcgattgctgctgctgctgctgctgcgc 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agatttttggcccgaaggttgagtagactgatgcgattgctgctgctgctgctgctgcgc 150
Query: 360 agatgatgccgatcccagcagttgattttgaccatataccattgatggaggctgctgata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 agatgatgccgatcccagcagttgattttgaccatataccattgatggaggctgctgata 90
Query: 420 caatggctggttataatactgttgttggatttgaggaacgttcggtatttgtgatgtttg 479
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 89 caatggctggttataatactgttgttggattttaggaacgttcggtatttttgatgtttt 30
Query: 480 aaccggaggaggaggaggagatatatt 506
|||||||||||||||||||||||||||
Sbjct: 29 aaccggaggaggaggaggagatatatt 3
>3x_Contig762
Length = 2085
Score = 329 bits (166), Expect = 5e-90
Identities = 167/168 (99%)
Strand = Plus / Minus
Query: 785 taggaccgaaaccaacggcccaacggattctcaaaccatgtgtcggattgccaccaccag 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 taggaccgaaaccaacggcccaacggattctcaaaccatgtgtcggattgccaccaccag 2026
Query: 845 tgaaatgcgccatgatcctctccgcttctgctcttgaatagactttcacaaaggcgtgct 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 tgaaatgcgccatgatcctctccgcttctgctcttgaatagactttcacaaaggcgtgct 1966
Query: 905 tacgggcattattcaaaataamactctgaacctcaccgaattgtctta 952
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1965 tacgggcattattcaaaataacactctgaacctcaccgaattgtctta 1918
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8486
Number of Sequences: 1807
Number of extensions: 8486
Number of successful extensions: 350
Number of sequences better than 1.0e-20: 2
length of query: 954
length of database: 10,358,551
effective HSP length: 16
effective length of query: 938
effective length of database: 10,329,639
effective search space: 9689201382
effective search space used: 9689201382
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)